Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0374900

Sequence Length

275 nt

GC Content

0.4400

AAUAUUUUUCAAAAAUCAUCUUCUUAGCUUAAAAAUACAAUAUUUAAAAAUUCAUCAGGCCAGGUGUGGUGGCUCACGUCUAUAAUCCCAGCACUUUGGGAGGCUGAGAUGGACGGAUCACUUCAGGUCAGGAAGUUGAGACCAGCCUGGGUAACAUGGUGAAACCCGACCUCUACUAAAAAUACAAAAAUUAGCCCAAUGUGGUGGCAUGCACCUGUAAUCCCAGCUACUUGGGAGGCUGAGGCAUGAGAAUCACUUCAAUCUGGGAGGCAGAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-64.30 kcal/mol

Ensemble Metrics

Free Energy: -71.07

Frequency: 0.0000

Diversity: 59.09

Structure Visualization

Structure Prediction

MFE Structure Prediction

((..................))(((.((((....................((((((((.((((((.((((..(((((((((...(((.((((.(((...))))))).))))))))....(((((.......))))))))))))))))))).)....)))))))...............................((((.((.((((((((((..(.((..((((((....)))))).)).)..)))))....))))).))...)))))))).)))

Thermodynamic Ensemble Prediction

({.{{,{{....,}),.,}.}}(({.((((..,,,,,...,,,},.....{(((((({.((((((.,(((,,{((,((((({,..((,((({.{{{.,,))}}})}.})))))))}}|||||,|.||||..},,,,}}}))))})))))).}....))))))}............{{,,...........,}}}((((.((.((((((((((..(.((..((((({....}))))).)).)..)))))....))))).))...)))))))).)))