Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0376000

Sequence Length

219 nt

GC Content

0.3699

GUGCUGAAGGUACAGCAGUGGUAAUCAGAUUUAGAAACAUUAGUGAACAAGACAUAUGACUGCCCUCAAGAAACUUCGUUUCUAGUGGAAAGAAACUAAAUAAUCUCACACAUGAGAAAAUCAAUCAUAUAAUAACAGGAACAUAAAAAUGCCACCAAAAAUAUGAUAAAGGGCAAUGAGUGGGGCAAGAAAAUGAUAGUGUGGGAGGGAGUUGAUAGG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-34.20 kcal/mol

Ensemble Metrics

Free Energy: -38.13

Frequency: 0.0017

Diversity: 44.38

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((...))))).(((((.(((.((...((((..........))))...))..))).)))))(((.....((((((((((((.......)))))).......((((((((((((.........)))).............(((.....((((.(((...((.((........))))...))))))).....)))...)))))))).))))))...)))

Thermodynamic Ensemble Prediction

((((({..,,,,)}||(((.(((.{{...{{{{.........,}}},...,}..})).)))))(((..,..((((((((((((.......)))))).......((((((((,(((.....,,..}}}}.............{{,.....((((.(((...{{.((........))}}...))))))).....}}}...)))))))).))))))..,)))