Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr3_0376600

Sequence Length

192 nt

GC Content

0.3385

GUGGUUCACUUGUUCCUGGGGCAUAUCAAGAAAUUAUCACGGAUGAUUAUUUAGUUUUUAAACAGAAACAAAGGCAAAUGAAAGUAUGUCUAUACAAUGUGAGUUAUAGGUUAAAACCCCUUUCCUUAAAAAGUCAAAAAAUAACAGAUGCUGAUGAGGUUGCAGAGGAAAAGGAACACUUAUACAUUGUUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-25.90 kcal/mol

Ensemble Metrics

Free Energy: -30.86

Frequency: 0.0003

Diversity: 58.40

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((.(((.(((.((((((.(((.(((((...(((((((...))))))).....((((((....))))))..(((((.((....)).)))))........((((....(((........)))...)))).......................)))))..))).))).))).)))))))))(.(((...))).)

Thermodynamic Ensemble Prediction

(({{(((.(((.((((({.(((.{((({...(((((((...))))))}.,,,.((((({....})))))..(((((.((....)).)))))..,,...,{{{{,...{((,.....,,|||{,||||,..,,,||,............,.,)))))..))).)}),))),)))))))))(.{{{...})).)