Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr4_0182900

Sequence Length

194 nt

GC Content

0.4639

GAUUUAGCACUGGUAAAUGGUAUGAAAAGGCUAUAAUAAAAGACUAUUCCCCUCAACCUUUUUUUUUGAGACAGGGUCUCACUCUGUUGCUCAGGCUGGAUUGCCAUGGUACAAUCAUGGCUCACUGCAGCCUUGACCUCCUGGGCUCAAGCAAUCCUCCCACCUCCCACAGCACCCAAUAGCUGGAAUUAUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-43.40 kcal/mol

Ensemble Metrics

Free Energy: -47.21

Frequency: 0.0021

Diversity: 41.13

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((..((...(((....((...(((.((.((........)).)).))).))...)))........(((((((((((...)))))))..))))(((((.(..((((((((...))))))))....).)))))(((((((...))).))))))))))((......(((...(((........)))))).....))

Thermodynamic Ensemble Prediction

((((..((...{{{..,.(({.,((,.,({||,,......,,.,),)},.}||||}))........{({((((((((...)))))))..)})|(((((.{..((((((((...))))))))....}.)))))|{({((,...))).))),))))))((......{{{..,(((........)))))}.....))