Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr4_0184000

Sequence Length

478 nt

GC Content

0.3075

UGUGAAACAUGAUUCAGAAGUAGCAACUGGAAACAAACACAGUCCUCUGUUAACAUCUCAGAGUUCACCAAACUUUUUUCUUACCCAUCUCUGAUCUCCAUAGGCCUAAUGUAACAACAAGAGUAGAAUACUAAUUUUCUGGGGUACUGUGGGUUUGUUUGCUUUUUUUUCCUGAGGACCGGUAUCCUUAAAUGCCUAUCUCUGUGACCUCUGCCACAAACAUUAAUAGUCCCACAUUUGUUAAUGCAUUUUUAUGUUGAUACAAAUAUAGUCCUUUCCUAGAUAAUUUUUUUUCCUUUGGUUUAUUUUACUUCAUUCAUAAUUCAUAUCAAAAUAGCAAUAUUUAAAUGAGACAAGUCAAUUCCUUAUAAUACAUUCUUCCAUUUUCAAAGCCUUGCACAUUUAAGAAUUAAAAUAAGAGAAAACCUUUAGAAGUUUAAAUCCAUUAUUCUUUUUUUUUACUUAAAAUUUUAUUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-68.70 kcal/mol

Ensemble Metrics

Free Energy: -77.69

Frequency: 0.0000

Diversity: 103.54

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((..((((....(((((((.....(.((((((((((((....)))).......((((((.........................))))))...((((((((((..(((....)))....(((((........))))))))).)))))))))))))).)........((.(((((..(((((......)))))......((((........))))..(((((((((........)))))))))......((((((......))))))(((........))).........))))).))......)))))))..))))..)))))....(((((....)))))...(((......))).((((((((..((.((((((.......(((....))).......))))))))..))))).))).......(((((..(((.....)))..))))).....)(((((.......)))))

Thermodynamic Ensemble Prediction

((((((..((((....(((((((.,,..(,((((((((((((....)))).......((((((.........................))))))...((((((((((..{{{....}}}....(((((........))))))))).)))))))))))))).}...........((((({.(((((......)))))......((((........))))..(((((((((........)))))))))......((((((......)))))))}}}}}....|||..........}}},..)),.....}))))))..))))..)))))}{..,((((,.,,},|||,,,(({,...,,},..{{{{{{{{..,..{{((({..,,...{{{....)))...,,..}))))}||..}}}||,|||.......{({{{..{{{.....}}}.,))))}.}}}}}|||||,....,.}),,)