Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr4_0191100

Sequence Length

288 nt

GC Content

0.3403

UUGAAUAAAAAUCAGCAAUAAUGACUCAUUAUAUACUUUGCUCUACACUUUGACAGUCUGAAUUAGGAAGGCUUAUACAACAGUUUUGUUUCCCAAGUUAUGAACACUUAAAAGUUUCAGACAGACCAACAAGGACAGUAUCAGGGAUAAGAACAUGGGUCUUUAAGUUAGACAUUACUGAGGUAAAAACCUAGAUCCACCACUUAAUAUGAUCUCAGGAAAGCUUAUAAUAGUUUCAGUGCCUCCUCAACGCUAAAACAAAGCUCAUAUCUAAUUAAUACAUUCUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-41.10 kcal/mol

Ensemble Metrics

Free Energy: -45.72

Frequency: 0.0006

Diversity: 88.50

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.......))))(.((((((...))))))......((.((........))))((((((.....((((((((((......(((((...((((..(((.((((.(((....))))))))))...((.....)).........))))..)))))))))))))))...))))))......((((((....((((((((.............))))).))).(((((......)))))...))))))......(((.......))).......................)

Thermodynamic Ensemble Prediction

((((.......))))(.{{((((...|||}}}...,{{{{,{,,,,.,,{,|...((((((.,,.,(((((({{{{......||{{{,,,|{|{..{{{.((((.{{{....})))))),}),},|,..,,,))...},,..,)))}.,})}}})))))))}}).,,||||}}......((((({....((((((((.............))))).))).{((((......))))}...}))}})......|||.,....,))),..,.,,,,,,,...........)