Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr4_0586900

Sequence Length

356 nt

GC Content

0.2528

UAUUCCAAUUCUCCCAAAUUAAAGACAUUAAUAACAGAUAUUUUGGAAAGAUUGCUUAAAAGCCCAUUUAAGUAACAUUAACUUUUAAAAUCUAAACAAGUUUCCACCUUGAUUUUGUUGUAACAUAAUUCCUUUAGUCUAAAUAAUAACCUUAGUACUUCCACUUCAUAUCCAAAUAUCUUUAUAGUUCAAUAUCAUCUGUUUUCAUGAUUACUACAGGGAAAUGUUCUUCCCAAUUCUCCCAAAUUAAAAAAUAUAUAUAUAAAGUCUUUUAAAAUAAUUCAUAAAGUCCAAUGAAAAUUACUUUACCAAAUACUAAAUAAGAGCAGAUUCAUUUCUAUUUCUUUGUUUCUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-32.80 kcal/mol

Ensemble Metrics

Free Energy: -42.28

Frequency: 0.0000

Diversity: 64.63

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((................((((((....((((.((((((((.(((....(((((((((......)))))))))..........(((((((..................)))))))..................(((((((.........)))).)))...........))))))))))))))).((.....(((((........)))))....)).(((((......)))))................................))))))........(((((........))))).............))))(((((((((((.(((......)))..))).))))))...))

Thermodynamic Ensemble Prediction

((((..............,.((((((.,{,{(({.((((((((((((.,,.(((((((((......)))))))))...,......,,.,,,...,,{{{{..........)}}}}|||,.......,,.......(((((((.........)))).))}...........)))))))))))}}}}.{{.....(((((........)))))....},.(((((......)))))............................,,,.)))))),,,..,..{{{{(........}})},.,}}},}}}}...))))(((((((((((.(((......)))..))))))))))...))