Sequence Details

BLAST PRIMER
Symbol
hsa_chr5_0134200
Sequence Length
406 nt
GC Content
0.4901
AAGAGCACAUCCCACCAAUCUAAAUAUUCGAAAAGAGUCAAAUUCUUCUGUUGUAUUUCCAUCCUCUUGACUGGGUUUUUCACUAAUCAGCUGUUUCCUUAGCUUCAUUGCUUCUUCGAAUCUGGAAAGGUACUGCUCUAGGCCAUGGCGGGAACCCCUCUGGACCGAGUCCGCUGUCAGGUCCCCUCUGUUCCGCUGCCGGAGCUCAAGGUUGACAUCACUACUGCACUCAGGUGGUUUAAUGAACGAGUCCAAUUUGUCUCCCAGUUGGGUCCCCUUUACCUCGGCCACACCACCCUGCUGGUCAGUUGUUCCUGUACUGACUGAAUCACCCAGCACUACUCGCUUUGAAACGGAAGGAACGCUGAGGGAGUUCAGUUUAUCACUGUCCUGCUGCUUUGAUUUU

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-97.00 kcal/mol
Ensemble Metrics
Free Energy: -106.26
Frequency: 0.0000
Diversity: 143.65
Structure Visualization
Structure Prediction
MFE Structure Prediction
.((((((......(((..((((...(((((((((((((...)))))).............((((........))))............(((((......)))))..........))))))).))))..)))..)))))).((((..((.(((.((((..((((((((((((.(..((...(((.(((..((((((....))))))...)))..)))...))..).).)))).))).((((...))))(((.(......).)))))))..)))).)))....))..))))..((((......))))((((.........))))(((((((..((((((.....((.((((......))))))..)))).))..)))))))..((((..((......))..))))...
Thermodynamic Ensemble Prediction
.((((((,..,,,,,,..,,,(,{{((,,,{.{(((({...}})))}.....}}}}}}.,{{{{....,..,))},..........{{(((,(.,,{{{|,|}|{{{..{{|{,|||},,,.})))..||}...{||||.((({..((,(((,(({{..{{((((((({{..{..{{|,|||||{,,..(((((|...,))))))...})),,)}},..,,.,|,},}}}}.|||{((,....|,}|(((,{,.,,,.}.}}}))))..)))}.}},....}),,)}})..}}}},,.{(({(({(((({({......}}.}}||||,...,||}}|}....,,}}..}}},.,.,)))))},))))}))}||,,||||.....))))..}}}.))))))......
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