Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr5_0545100

Sequence Length

187 nt

GC Content

0.3476

AACAAUUGCUGUUAUUCUGAUUGCUAUUGUGUGUAACUUCAUCUGAUAAAGAAUCUGUUUCCUUUGUAUCAUCUUUUUUGUUAUUACUAAGUGCUACGACUUUUGGCUGGUUAAUAGAGGUUUCAAUUAAUGGUGGUCGCAUCUCCGCCAUUUUCAUCUCUUCAUCAGAAGAAAGUUCUUCAGAUUC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-33.90 kcal/mol

Ensemble Metrics

Free Energy: -37.96

Frequency: 0.0014

Diversity: 41.89

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((.((.((((...)))).)).)))))(((......)))........(((((((........(((.((.(((.............))))).)))(((((((..(((((....((((((.......((((((((........))))))))...))))))..)))))..)))))))...)))))))

Thermodynamic Ensemble Prediction

{(((.....}))}{.(((({..{{.,|||,({({{{(......((((({{(((..,,.,,,.,,.,||,)}..,,....)))).,}}.})}})}.,,(((((((..(((((....((((((.......((((((((........))))))))...))))))..)))))..)))))))..))))).,.