Sequence Details

BLAST PRIMER
Symbol
hsa_chr6_0029800
Sequence Length
418 nt
GC Content
0.4282
UAGUGAUGGACACUUAUGGAGUUUUCAGAGACUUAUGCAUUGGGUAACAAGGCACUGCAAGAAACCCCAGAUAGCACAGCAUCAUCUCACAUUUACACCACAUCACAUCAACAUCGAUGCUAGGAGGUCUAAAGCUGAUGCCACCUUCAGAGCUGCAAGUAUCCAAAAGACUCCACUCAUGACACCAGCUCACUCCUGAGUCACAUCAGCCCCUUUCAGAGUCACAGCCCCAGAACUAAGGCUAUCCAUAUGGGUUGAUUAUAAAAUCCAAAAAGCAGCUCCAAAUAUUAGAAACACUUAUUUGUCUGGCAGACACAUUCCCUAAUUUAAAGCCUCUUAUACUGUGCUUAAAAAUAUUCAACAGUCUUAGCAAAAUGACAAAAUAAACAGGUAGCAGCCAUGGGGUGGGCAGGGUAAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-81.60 kcal/mol
Ensemble Metrics
Free Energy: -87.49
Frequency: 0.0001
Diversity: 129.66
Structure Visualization
Structure Prediction
MFE Structure Prediction
(.((.....)))(((((.((((((....)))))).(((.(((.....))).)))((((.....((((((...(((((((..........................((((......)))).((((((((.((((.....(((((......(((((((............(((((......((((....).))).....)))))..((((((((.......((((..((........))..))))........))))))))...............)))))))((((((...........))))))..)))))..............))))..))))))))..)))))))...............(((..........)))..........(((....))).))))))..)))).)))))
Thermodynamic Ensemble Prediction
(.((,,{{{|,}(((,(,(({{({.,,,,}}|||.(((.(((,,...}},.||,{{||.....{{||||,..,|||,{({{{{,........,,,.,,,......((((......)))).,,{|{|||.|}|||.||,|||,,......|{{|||{.,,..,,,,.,,|,,||,}.},,|,|{,,{.({{{{,,,,||}}},..{(((((((......,{({{..((,,......}}..))))........)))))))}...............||}|||}(,,,{{...........}}||||{{,,||||||...........|||.,{|||,},,...,})})))}.,,...........|||,..,,.....)))..........||{..,.))).,))))),,))}},))}})
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