Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr6_0470100

Sequence Length

298 nt

GC Content

0.5000

UAUUCCUAAAUCAUAUAGGUUUCUGUCUUUUUUUCUCAGCCAAGUGGACAGGAACACAACUUGAUGUCCUCAAAGUAGCCCAAUAGGUUCUGGAACCGAAGUUCAGACUGGUCACCUCCCUCUGGCUGGCAGGAAAAUGGGAGGCCACAGAAGAGCUCAGCAUCUGAAGAAAGGGUGGUGCUGGCAGGCAGAGAGCAACAAGCCCUGGCUUCUUGUUGGGCUGGUAGUGUGAGGACUCCUGAGAAAAUCCAUUGCCUAUAUGGGCAGCAACAUGCAACAGCUGGGGGCUAAGUGUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-93.60 kcal/mol

Ensemble Metrics

Free Energy: -98.50

Frequency: 0.0004

Diversity: 87.02

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(..((((.......))))..)(((.((((..((((((((...(.(((((..((......))..))))).)......(((((((((((..((((.......(((((...((((.((((((((((.....)))).....)))))).((((....(((((((((...((((..(((((..((((..(.....)..))))....)))))..)))).))))))))).....))))..)))).)))))....))))..)))))).))))).(((...)))....))))))))..))).).)))

Thermodynamic Ensemble Prediction

.,..((((.......))))..}(((.(,{(,.((((((((...({((((({{{.......,,..,||||{{{...{{(((((((((({,,((((,,....,|||||,,,(({,.((((((((((.....)))).....)))))).{{||,...{(({(((((,,.{{{{..{{{{{,|||||,,|,,.,,|.,}||,....))))),.))}),))))))))),....},))}})))),)))}}....)))),,||||},.})))).(({...}))....))))))))..))).).)))