Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr7_0100000

Sequence Length

250 nt

GC Content

0.3040

UAAGUGGUGAGUAAAUGUGAAGGCCUAGGACACUACUGCACACUACUACAGACUUUAUAAAAACUGAACACUUAGGCUACACUGAACUAGUAAAAAAAUUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCUGGUGUUUUAGACAUGAAGUCCUUGCCCAUGCCUAUGUCCUGAAUGGUAUUGCCUAGGUUUUCUUCUAGGGUUUUUAUGGUUUUAGGUCUAACACUUAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-35.30 kcal/mol

Ensemble Metrics

Free Energy: -38.63

Frequency: 0.0045

Diversity: 44.36

Structure Visualization

Structure Prediction

MFE Structure Prediction

.......(((((....((..(((((((((((....(((..........)))....(((((((((((((.((((((((...((((...)))).............................................................((.((....(((.....)))...))))(((((............))))).)))))))).)))......))))))))))))))))))))).))))))).

Thermodynamic Ensemble Prediction

..,,,,.({{({,..{((,.(((({((({{{.,..{|{,.,,.,.,,.)}|,,,.(((((((((((((.((((((((...{{{,...,}))............................................................,((.((....(((.....)))...))))|((((.,,.......,.)))),.)))))))).)))......)))))))))))))}})))))).,))))),.