Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr7_0189100

Sequence Length

373 nt

GC Content

0.4718

AACACGCUGUCAAUACAGUUCACAGGGAAAAAGCAAAUGUGGUAUUUUUUUGUAUUUUUUAAAAGCUCCCUGGUCCCAGGUGUUUUGCAGUUUUCAAGGUCUUAUCUGCUAAAGGAAUGCCCUUUAGGUCACAGCAGGUCCUCUGCAGUUUGGUGGUGGCACAAGAGAAAACAUAAAAGAAACCAAGACUCAGGGAAACUGCCAUUCCCCCAGUCUGUUUCUGCAUGACAGUGGGGCCCAUUCCUGUCUCGAAGCAUCUUCUUGUUCCAAAUAUGAUGUCUGUUUAGAGUGGGUCUCAAUGGACCAGGCUGAGCUGCCCCUCUGUCUCUGCCUCCUCCUGCUCAGCCCUGACCAUCUCUGAGAGGAUGCUAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-100.90 kcal/mol

Ensemble Metrics

Free Energy: -109.32

Frequency: 0.0000

Diversity: 121.44

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(..(((((....)))))..(((((((((.(.((....)).).)))))))))........(((((..((((....)))).)))))((((...............))))((((((.....))))))).)(..((((..((((((.(((...(((((((((.((.(((..........((((((..(((((..(((((.......)))))..)))))))))))(((.(((((.(((((................(((((................)))))..((((((....(((((....)))))...)))))).))))).)))))..)))...))).))....)))...)))))).)))))))))))))..)

Thermodynamic Ensemble Prediction

(,,..(((({.,,.||}}}...(((((({{,,(({{,...,.,.,...}}))).}},,.....,||||||||,,,,.,,,||||,||||||,||{.,{{{...,,}},(((((((.....))))))).....{(({,,{{{{{{,|{{..,(((({,{{|,,..{{|,,..,.....((((((..(((((..(((((.......)))))..)))))))))))|||.|||{{,(((((,{{{{,.,,....,.,(((((...{{,.....},...))))}.,|{{|||}}}}|||||,,..)))))}||}})))),}}}}).})))},.}}}.,,|||.}}}||,}}}...}}))...)))))))))}))}.,)