Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr7_0189500

Sequence Length

374 nt

GC Content

0.5401

GGUCUACUUGACAGGCCAACAAGAGUGGUGGUCCCACACCCCACCCUGCCCUCAGCAUCAGACAAAGAGAACCUGGGACAAAAGCUGGGGCGAGCUGGGUCCCCACGUCGCUCUCUCAACCAUGAGCCAUCAGUAAUACUUCCCGAAGCCUCCUCAUCUCCUCCCUCCAGUUUCCAAGAAAGUUUGUUCCACUCACUCACACAUGCUCACACGGCCUAAAUCUUCCACCCCAAGCUUGUUCCAAUAUGAGUGUUUGCCAUUCCCAAGGUCCAACCAAGGGAAAUCGUUCUGUCAGCAGUUGGGCUAAUCUCCCCUUCCCUUCCUGAUGUCCAUCCGUCUCACACGUUGGUGUCUGGGCGGGCUGAGUCUUCUAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-85.10 kcal/mol

Ensemble Metrics

Free Energy: -93.88

Frequency: 0.0000

Diversity: 122.97

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.......)))))...((((.(((((......)))).((.(((((((...(((((((.....((((.....(((((..((.((((((((((((((..........((((..........)))).................(((((....................)))))...(((.(((((..((......................))..))))).)))...))).)))))))))))....(((((.....)))))....(((...)))(((((((......(((....)))..(((........)))))))))).))..))))).....)))).....)))))))..))))))).))).))))....

Thermodynamic Ensemble Prediction

(((({....,..}|}|}...,(({((((,({{....,)))}})){{{(({(..,(((((((.....((((...,{(((({.{((((((((,(({.((({...,,}..},||{{..........)))}.....|,....,,.,..{{{{,............,,.,,}}})))),...|...,},}}},,||,,{{,,,..{{{.({{.....{{,............,,...})),))).......))))))..,}...(((((..(((...)))..)))))...,..,,||{{{.,|..(((........}}}..},},..}))}))}}}..,,{|||},,,,.}}}))))..))))))).})}}))}}..,,