Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr7_0398100

Sequence Length

250 nt

GC Content

0.3600

GUAAUUUUUGUAUUUUUAGUAGAGACAGGGAUUCACCAUGUUGGCAAGGCUGGUCCUGAACUCGACCUCAAGUGAUCCGCCCGCCUUGGCCUCCCAAAGUNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNUUUUUGAUCUUUAAAGUCACUCAACCCUUCACAAUAGCCAGGAUAGGGAAUCAACGUUAAGCGUCCACUAAGAGAUGGACGGAUAAAGAAAAUGUGGCCU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-37.90 kcal/mol

Ensemble Metrics

Free Energy: -43.14

Frequency: 0.0002

Diversity: 43.89

Structure Visualization

Structure Prediction

MFE Structure Prediction

(.(((((((((.((((....))))))))))))))((((((((((((((((.(((.....(((........))).....))).))))).)))...............................................................((((.......)))).....((((((.(........))).))))........(((..((((((........))))))..)))....)))))))..)

Thermodynamic Ensemble Prediction

(.(((((((((.(((,....))),))))))))))((((((((((({((((.(((,..,,{{{......}.))},,,,.))).))))}||)}..,,,..........................................................(((,.......)}},.....((((,{.{........)}}.))))........{((..(((((({,...,}.))))))..))}.,..)))))))..)