Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr7_0665800

Sequence Length

408 nt

GC Content

0.4926

UAAAAGGAUGCAAAAGAUACACCACGCAAACAUUAACCAAAACAACGUGGCCAGGAGCGGUGGCUCACGCCUGUAAUCCCAACACUUUCGAAGACCGAGGCGGGCGGAUUGCUUGAGCUCAGGAGUUCGAGACCAGCCUGGCCAACAUGGUGAAACCCCAUCUCUACAAAAAAUACAAAAAUUAGCUGUGUGUGGUGGUGUGCACCCGUAGUCCCAGUUACUUGUGGGGCUGAGGCAGGAGGACUGCUUGAGCCCAGGAGCUCAAGGCUGCAGUGAGCCAAAAUCAUACCACUGCACUCCAGCCUGGGUGACAAAGUGAGACUGUCUCCGAAAAAAGAAAGAAAGCUGGAGCAGCUCUAUGAAUAUAAGGCAAAGGAAUACAGAAGGACAUUACGAAAGGAUAAAAAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-114.10 kcal/mol

Ensemble Metrics

Free Energy: -121.85

Frequency: 0.0000

Diversity: 89.38

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..((.((((.......(((((((((...................(((((((((((....)))).(((((((............((((.....))))))))))).....((((((((....))))))))......)))))))....((((......))))..........................)))))))))...)))).))(((.(((......(((((((((((.((((((.....)))))).))))).(..(((((.(((((.((((((..............)).)))).))))))))))..).....(((.(((.(((((................)))))))))))......)))))).....))).))).........)))(.............)

Thermodynamic Ensemble Prediction

((,..((.((((.......(((((((({..,.,,............,((((((((.,,((((||...|))),((,,,,,...{.,{((((....,|}||}|||||}},,})||{({{(|,.,,}})))))}},,..)))))))}.,,{((,(....,}))),....................,.,.,}))))))))).,,)))),)}(((,(((......((((({(((((.((((((.....)))))).))))).(..((((,,((((({((((.,............}}))})},,.}}))))))))..).....(((.(((.(((({................)))))))))))..,...}))))).....))}.}))....,..,.}))(.............)