Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr8_0163500

Sequence Length

293 nt

GC Content

0.3447

GUACAGUUGGAGUGGUUGGAAAUUCAACAGUGAAUAACAGGCAAAGUGCUAACUCCCAAAAAGUUUGCAUUUUUGUGGCAGAAGUCAGACAGCAAAUACACAAAUAUAUGUGAGAUGGCAGUCAAUGUCAUAAAAACAAAUCAAAGGGGAAUAACAAAUGAUUAAGUAUUAUUUUUAUAAAGGGUAGUCAAUGAUGGACACUCUGAUAUGAUGAUAUCUGAACAAAGAUCUAAAUAAAGGAGAUGAGGAAGGGAGUUAUACAGUUAUAUGCAGAGAAAAAGUGUUCUAGUCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-49.10 kcal/mol

Ensemble Metrics

Free Energy: -55.53

Frequency: 0.0000

Diversity: 96.61

Structure Visualization

Structure Prediction

MFE Structure Prediction

.....(((((..((.(((...(((((....)))))..))).)).....)))))((((.....(((((..(((((((((((.......(((.((.....((((......)))).....)).)))..)))))))))))))))).....))))........((((((....((((....))))....)))))).(((((((((((((((((((((((((.((........((((.........)))).........)).))).)).)))))).))))......))))))..)))).

Thermodynamic Ensemble Prediction

.{((.(((({..{{.(((...{{{||,,..})}}}..)}|,||...,|))|||((((.....(((((..(((((((((((...,,,,{{{.((...,.((((......))))...,,)).}))..))))))))))}))))}.....}}},.....,,,((((,....}|||||,,|}},.,,,||}|||..{{{{{||||||||((((({{{||||{((...,..,.{(((.......,,)}})......})))}})}}.,.}))))}).)}}},.....,))))),.}))),