Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr8_0416500

Sequence Length

605 nt

GC Content

0.4000

ACUUUGAGAAAUAAAUGAGUCUUAACAGGAAAAUCGAGUUUACUUAUUUCACUUUGACUUUCAAUUCAGUGUUAAACAGUGGUUGUUUCUAUACAACACCCUCUCACCCAACCACUUGGGGAUGCUGGCACCCCGCAGAGGACGUGCCUCCCACCCAUGAAAAUCACAAUCAAAGCUGCAUAUAACAGGUCACAAUAAUCUCUGAAGGGUAGGGAGAUGCAGACACUACACAGGUGAGUCAAAGACAGGCUAAGUUGCAUUCAGAGGAAGUGAGGCUCUCACAUAUGCCGCCCCCCCCGCACCCCGAGGAUCUUUCAGCUUGCAUGUGUGUGAACAUGUGCUCCACUCACCAGCAUUCCCCUAACAAUGGCUCCACAAAAAAUAUUCCUAGAUAUCACUCUAGUUAUGGGCUUUUUCCCAGAGUACUCUUUAUUUUCUCUUUAACUUGCUCCAUAUUAUCUUGUAUUUUUGGUAAAUGCAUAUGAUAAAUAUUAUCCACUAAUUAAAGUUUAAUAAAGCUAAAAAUGUCACAAAUUUGCUAUCAAGAAUCAAAAGGAAGAAACUCAUUAAGAUGAAAUAAGAUGACAGCAAUCUCCUUUAUCCGU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-116.10 kcal/mol

Ensemble Metrics

Free Energy: -130.07

Frequency: 0.0000

Diversity: 211.83

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((((.((((.((((((((...(((..((...))..))).))))))))((((((((...))))...))))......((((((((.......................)))))))).((((((((((((((.((.....))..))))(((((((((.(...............(.(((.......))).)...............))))).)))))((((((.((((.....))))((((.......))))...)))))).....(..((((.(((((.(((((((((.((....((((.....)).))........))..))))))))).))......))).))))..)))))))))))........(((.(((.((.........(((((......))))))).)))))).)))).))))))((.(((((((....((((((..((....((((((((.(((((((.....)))))))...))).)))))....))....))))))...))))))).................................((((((.((...(((((............)))))......))))))))....))

Thermodynamic Ensemble Prediction

((((((,(({{.{(((((((...(((.,((...}}..}}}.}}))))}}{{((((((,..,|,....}}|}|,,...{(((((((.......................)))))))).(((((((((((,(({(,.,,{{||..|{{|(({{{{{{{.{{,...............{{{.......})),,,,,.....,,}})}..)))).}||||.{{{{..(((,{{{{,,|||(((,{{{{{..|{{...,,,||,|,..,.{{,,((({({,,|,|||,,{{||.||...,{,{{.....}}.)).,}},,..))}}))})))))),),...}}}}))}}.,,..))))))}}))),.......{{{.{,,............(((((......)))))..,}|||},.,}}).)))))){{.|||{|||,,,}|{{{||..,|,...,{{{((((.(((((((.....})))))}...}}}}}.}}},,........,}},}||,,}}}}}))|......,,......,,,}}}},,,,}},,,..,|||||.||...||{,,..|||||,...||||},.....,)))},))),},.))