Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr9_0073400

Sequence Length

359 nt

GC Content

0.3872

GAUUGUGACUUCCCCAUUCUAAACUUUCCAACCACUCCCUGCCCACAUCCUGCCCAUUCUCUUAUUCUUGCUACUUUUCUCAAAAAGGCUACGGUCCAUUUAAUUUCUGUUUCCUAUAUUACAAUCUUAUUCCCAUCUUUCUUCACCAAAUACCUUCACCUAUCACCGUGACGGGGUUUUCCAUGUUCUGAAAGUUCUUCCAUCUCACAGCUUUAAAAAUCAUGCUCUUUAUUCCAGAGAUGUCAACUGCAUUCGAUCUUUGUGGAGUAUACUAGUUUAAAUAUUAUUUCUGUUAUUUUAAAGUUAGUGGUUGUGCAGUGGUAGUAGUUGGGCAUGGGAAAGUGGCAUUUAGGGCAAAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-62.40 kcal/mol

Ensemble Metrics

Free Energy: -68.94

Frequency: 0.0000

Diversity: 100.80

Structure Visualization

Structure Prediction

MFE Structure Prediction

((.(((.((((.(((((.........((((((.(((((((((..(((.((...................................(((..((((............))))..))).....................(((((..((..(((..(((((((........)))).)))..)))...))....)))))..............(((............)))...(((((((.(((.(((..........))).))).))))))).(((((((((((...............)))))).))))))).))))))).)).))).)))))).))))).)))).))).))(.......)

Thermodynamic Ensemble Prediction

((.((({,,,,.,,{{,..........,,,,{.{{{{{{(({,||||,|,{({{{.............,{{,,,,,,........(((..((((............))))..))).....................{{{{{...,..{((..(((((((........)))).))),,}}}.,,||,...}}}}}.....,,,...(((((({,,,,.......|,,...(((((((.(((.(((..........))).))).))))))).{{(({{{{{((,,..,.....,.,,})))))),))}))))})))),})})).)),.})))))}))))),})))}))).,,|}},,,..,