Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr9_0073800

Sequence Length

310 nt

GC Content

0.3871

GUCUUUCUCACAUGACUGACACUCAAUCUUCUUUCUCACUCUACCACAUUUGAUGACCCCUGUGAUUACACUGAGCCCACCCAAAAAUCUAGGAGAAACUCCCCAUCUCAACAUCUUUAACUGAAACACAUCUGAAAAGUCCCUUUCUCUAUGCAAGGUAGUAGCCACAGGCUCUGAGGAUUAAGUAAUGGAUAUCUUUGGAAGCCAUUAUUGUGCCUAUCAGAACAAACUGAAAAACAAUUUCUGUAUUAAAAAUGGCAAUGCAGGUAAUGAAAGGAAGUAUAAAAAUUCCAGAAAACUGAAAUGGCAG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.00 kcal/mol

Ensemble Metrics

Free Energy: -52.27

Frequency: 0.0000

Diversity: 75.56

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((..((......))..))).......(((((((.(((...((((.((((........((((((.(((((((..((...............((((...))))...............................((((......)))).....))..))).)))).)))))).(((((((((............))))))))).(((((((((((.....((((......))))...)))))............))))))))))..)))).))))))))))..................(((......)))

Thermodynamic Ensemble Prediction

(((..((......))..))).,{,..,(((((((.(((...{{{{.,....,,,,...((((((.(((((((..((...............((((...))))....................||.........{{{{,,....}))}.....))..))).)))).)))))).(((((((....((((((((.,.{(....)).}))))))))...)),.||||}.....},||.......},||{{{{{{.........)))))}))}).))}}))))))........||.{{{....}))...},,.})