Sequence Details

BLAST PRIMER
Symbol
hsa_chr9_0138800
Sequence Length
487 nt
GC Content
0.4435
CUCCAGACUCCUAUUUCCAAUUGCCUACGUGAUAUCUCAUUGGCAUCCUACACUCAGUCCAGAUUGAAUUUAUUUACCCCGUUCCUCCUCUCACUCUCCUUUUCGUCUUCCAGUGUUCCCUAAAUACUGAACACUGCUCGCUGGAAUAAGCCAAAAACCUGGGAGUCAUUCCUGACACCUCCCUCUUCCCUUGUCCCAUACUCAGUCAAUCGCUAAAUCCUGUUAAUUCUUACUCCCAAAUAACCUCUCAAAUUAAGUCUGCUUCUUUCCAUUUUCACUCUCACGCACUCUAAUCCAAGCCCUCAUCAAACUACUAUAACAGCUUCUAACUGAUCUGUCUACAAGCUCUCUUGCCUUAUUCUUCCAUCAUUACAUUGCAGUCAGAUAGCCAGAGUGAUCUAUUUAAAAAGUAAAUCCAGUCCAGGAGCGGUGGCUCAUGCCUAUAAUCCCCGCACUUUGGGAGGCCGAGUCAGGUGGAUCAUCUGAG

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-81.92 kcal/mol
Ensemble Metrics
Free Energy: -89.14
Frequency: 0.0000
Diversity: 104.57
Structure Visualization
Structure Prediction
MFE Structure Prediction
(((....((((((........((((...((((....)))).))))........(((((....)))))...........((((((((........................((((((((..........))))))))...((((((..............(((((((......(((((...........................................)))))......))))))).....................(((((.((.......(((((((...((.................................(((.......)))(((((.((.(((((......))....................))).)).))))).)).))))))).......)).)))))..))))))..)))))))).(((....)))................))))))...)))(((((((...))))))).
Thermodynamic Ensemble Prediction
(((..{,((({{,........((((...((((....)))).))))........{(({{....}}))}...........((((((((........................((((((((..........))))))))...{(((({...,,.........{((((((,.....{{{{{.............,||..........,|.,,...,,.......})}}}......})}}}}}.....................(((((.,{.......(((((((...((...........,{,...................,{|,,|,...|,}{,{((,{{.{{{({......}}....................,}).)).})))}.)).))))))).......,,.)))))..}}}))}..)))))))).(((....)}}........,.......)))))),..)))|{{||{|,..))))))}.
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