Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr9_0337300

Sequence Length

287 nt

GC Content

0.3693

AAGAUUUACUACCUAGGGGACUUUUUAGGUUCAUAUAGCUUUCUAUUUCAUCAGCCAGAUUACGUGCAAUAACUGGAGAAAACAACUUAUCUUCAGAAUCAGGAGUUUUUCCUCCUGUACAUUCAGUGGCUAAAAGAGACAAAGGAUCUAGUCCAGUUUCAACAUCUUCCCUCUGAACCACCUUAGCAAUACCAUAUAAACUACUUCUCUUAUUCCUCAGAUCUUUGGAUACUGUUUUCAAGUCUCUGGACUGAUUACUGUUACUAUCACUUAGUAGACUCUCAUAU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-46.10 kcal/mol

Ensemble Metrics

Free Energy: -52.53

Frequency: 0.0000

Diversity: 69.20

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((((((((((((....))))))).....((((....))))...((((((((((.............(((((((..........)))))))...((((((......))))))....(((((.((......(((((...((((...)))).))))).........)).)))))........................................((((((....))).)))..........))))).)))))................))))))).))).....

Thermodynamic Ensemble Prediction

.((({{{{{{((((((((....,}}})))},...,{{{....}}},...{{{(((((({....,{{,.....(((((((.{.....,}.)))))))...{(((((......)))))),,,.,{{{{,||,,....(((((...((((...)))).))))).........}}.})))}.......,|...............................,{|{,,..,|}|,.,}}...,,},}}.))))).))))}....,,,,,,,.....))))))).))).....