Forensic RNA Knowledge Base

Sequence Details

BLAST PRIMER

Symbol

hsa_chr9_0606600

Sequence Length

158 nt

GC Content

0.3734

GUCCUCGCUUAGUAAUUAUGACAUAGUGAAUGCUUAAAAAUAAGUAUGCAUCUCACCACCACUUAUUUUCAAAAUCAUCUCAAAAUACACAAUUUCUGGGAGACUAUAUUGCAAGUGUGCGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUGUAUGU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-23.90 kcal/mol

Ensemble Metrics

Free Energy: -27.49

Frequency: 0.0030

Diversity: 61.38

Structure Visualization

Structure Prediction

MFE Structure Prediction

....(((((..((.......))..)))))(((((((....)))))))(((((.(((((((((.(((..................(((((((....(..(.(.(((........))).).)..)....)))))))..))).))).))).))).).))))

Thermodynamic Ensemble Prediction

,,..(((((..((.......))..))))){((((((....))))))}((((,.(((((((((.,{,.........,.,..,,..(((((((....,,,{.{.{((.....,,.}}}.),),,)}}}}))))))}},),),)})}),),),)}).))))