Basic Information
Symbol
SH3BP5-AS1
RNA class
lncRNA
Alias
SH3BP5 Antisense RNA 1
NONHSAG034519.2
HSALNG0024394
Location (GRCh38)
3:15254184-15265124
Forensic tag(s)
Cause of death analysis
External database
Transcripts
| ID | Sequence | Length | GC content |
|---|---|---|---|
| HSALNT0051401 | AAGAGCUCUUACCCAGAAGAACAAUCUUUAGCCCUCAAGGUCACUGAAA… | 5376 nt | 0.4555 |
| HSALNT0051402 | GUGCUGCUUUGGCUCUUACUGCUGCCACCACUGCCACUGCUACUGCUGA… | 4190 nt | 0.4683 |
| HSALNT0051403 | GUGCUGCUUUGGCUCUUACUGCUGCCACCACUGCCACUGCUACUGCUGA… | 4855 nt | 0.4589 |
| HSALNT0051404 | CAGAACAGCACUUGGAAACAACCUCAGUGAUCAAUACUGACAGCACAAC… | 4077 nt | 0.4739 |
| HSALNT0310551 | CUCUGUGAGUGCCUAAUGAAGGAAUGUGACUUCCCAAGCCUGAAUGACC… | 2638 nt | 0.4735 |
| HSALNT0310552 | AGGCAUGAGCCCUUGGGCCCAGCCGGCUGUUUAAUGUUCUUAAAUAGCA… | 5570 nt | 0.4546 |
| HSALNT0310553 | GGACUGGGUUUCCGAGUCAUCUUCAGACACAAAGUUGCUACAGCUGUCA… | 2896 nt | 0.4748 |
| HSALNT0310554 | UUUCUUGAUGAGCAUGACAGAAACCAAGUCAAACUUCUAUCAGUUUUCC… | 2556 nt | 0.4714 |
| HSALNT0310555 | CUUGGAAACAACCUCAGUGAUCAAUACUGACAGCACAACCACAGAGACC… | 3748 nt | 0.4739 |
| HSALNT0310556 | GGUUCUCAGUACAUAAUCAUUUACUGCUUUUAUUCCUUGUGAUGUUUUA… | 3699 nt | 0.4872 |
Showing 1 to 10 of 13 entries
Summary
No relevant information is available at the moment.
Forensic Context
A study in humans identified numerous differentially expressed lncRNAs and mRNAs in sepsis patients versus healthy controls via RNA-sequencing of serum, with the lncRNA SH3BP5-AS1 being significantly upregulated (fold change=9.61) and noted as a potential biomarker [Yu et al. DOI:10.1016/j.heliyon.2023.e15034].