Forensic RNA Knowledge Base

Sequence Details

Symbol

HSALNT0319317

Sequence Length

451 nt

GC Content

0.4213

GGAGACGGGAUUUGUUGGUGGGUGUUCCUUGAGUGUAUGGAGCAGUCCUUUUGAUGGAGUCUUUAAUUUUGGGCGAAGUUUCUGGAAACCCAUCCUUUCACCAUCCCAAUUACUCUAAAGCUCGAGUCUCUGAAGCAUUUGAGAAAAAGCACAAAUUCAACAGCAGAGAAAAAGAGAGGUCGUGCAUACAAGCAAGAACAAGCAGUCUAAAUGGCAGAAUUCUUAGCCAGGUGUGGUGGUGUGUACCUGCAGUCCCAGCUACUUGAGAGGCCAAAGUGGGAGGAUUGCUUGAGCCCAGGAGUUCGAGGCUACAAUGAGCUGUGAUGGCAUGACUGCAUUCCAACCUGGGCAACAGAGUGAGACCCCAUCUCUUAAAAUAAAUAAAUACAUAAUAAAUGGCAGAAUUUUGGGAUUAAAAAAUAAGUUUAAAAUAAAAUGAUGAAAUUUAACA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-109.00 kcal/mol

Ensemble Metrics

Free Energy: -118.39

Frequency: 0.0000

Diversity: 140.29

Structure Visualization

Structure Prediction

MFE Structure Prediction

(((((.(((.......((((((((((((..........)))))..(((....(((...((((........))))...)))...))).)))))))...............(((((((....(((...((((((..(.(((((.(......).))))).).....))))))....)))...((.(((......))).)).((((((((((...((((..........))))..(((((((.....)))).))).((((((((........))).....))))))))))))))).(((((((...(((.((((......)))).)))(((.(((....))).))).)))))))...)))))))...))).)))))....................(((((..((..((((((...(((((.......)))))..))))))..))..)))))...

Thermodynamic Ensemble Prediction

{((((.(((,{{{(,,((((({((((((.,,....,|.}}}}}}.|((,...,,{|{|((((,......,|||,,,,{....,((|...}}}}}}.,,},}}}.},},,,{{{{{|....(((...((((((..{.{{(((.{......,.}}}}).}.....))))))....))),,,{{.{((,,,,..})),)),|{{(((((({...((((,{....,,..||||..{{||||{.,...)))).))|,|((|,.{{.,(({.,.,..,,,,})))|,)))))))||}.(((((((,{{(({.({{{.,..,,)))).,||{{(,({{..,,)},,)),.)))))))...}))))))..,))).)))))....................(((((..((..((((((...(((((.......)))))..))))))..))..)))))...