Forensic RNA Knowledge Base

Sequence Details

Symbol

HSALNT0319318

Sequence Length

600 nt

GC Content

0.4217

AAUCUGGUGGUUGUGGAGACGGGAUUUGUUGGUGGGUGUUCCUUGAGUGUAUGGAGCAGUCCUUUUGAUGGAGUCUUUAAUUUUGGGCGAAGUUUCUGGAAACCCAUCCUUUCACCAUCCCAAUUACUCUAAAGCUCGAGUCUCUGAAGCAUUUGAGAAAAAGCACAAAUUCAACAGAUAUUUAUCAAGUGUCUUCUCUGUGAUGUGGCUGAAGAUAGGAAUUUACAGCAUGGCAACAAAGAAUGAUACAACAUCUAACUGUACUAUGUGUGAAGUGCUACAAAAACAUAUGGCAAGCUCUGGAAUCAAGAAGUGAGGAGGCCAGAUGAGGAAACUGAGGGGUGAAGAGUUUAAGUCGUCUGCCCAAAACUAGCAGUGGGAGAGUGAUGCAGCCAGGAUUUAAACCCAGGUAGCCCAAAUACGGCAUCUACAAUCUAUCUCAAAUCUAUGGCAUCACAGAUGAGCUGGUGUCCACCUUUCCCUGAAGGAGUUGAAGGAGCUUUUAUAGAAGAAGUGAUAUCUGAACUGGACCUUAGAGAGUAAGUAAAAUUCUGCCAGAUAAAGAAUAUGUAAAAGUGUUAGUCCAGCCUGAGAUUUGUG

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-144.60 kcal/mol

Ensemble Metrics

Free Energy: -156.68

Frequency: 0.0000

Diversity: 242.20

Structure Visualization

Structure Prediction

MFE Structure Prediction

.(((((((((..((....))(((((.((..((((((((((((..........)))))..(((....(((...((((........))))...)))...))).)))))))....))..)))))..(((((((.(((.((.(((.((.(((((((((((............................))))))).))))((((((((((.(..((((((((...((((((.(((((..(((.(((.((......)))))...))).)))))))))))(((((.......(((.((((...(((..............)))...)))).)))((....))..(((.((....(((((((((.(((((.....(((..(.....)..)))...))))..).))))))))).....)).)))......))))).......))))))....))..).))))))))))......((((((...((((..(((.(((((((.....))))))).)))..)))).)))))).))))).)).)))..)))))))........))))))))).............((((.((((......)))).))))...

Thermodynamic Ensemble Prediction

.,{{{((((({((((({.,{((((({({,,(({(((((((((..,....,,.)))))}.{||..,,|||,}}||||.....,,{||||...,,,,{{||,.,}}|||||,,{||,,|||||..,{{((({.{{(,({,(({.{{.{{||{{||{||}.,..{{{,,...{{{.,{{|{{,,,..,,,}|||{||{{(,((({{(((.(,{(,(((({{..,|||,||}|{{{{..|||.||||,|,},,..||}},...))).})))})))))},||||,......|||.||||...{(({,,..,,.......,,,},.})))}}|},|,|..||,,,||||,..,,{{{{,{{{|,||{||||...|{{..|..,}}),.})),,,)}}}.,},)))}}},})))}}},.|}|},,,..})},.)))}}}},))))),{{{{||{..{||}||}}})},}..,,((({({,|,{(((..(((.(((((((.....))))))).)))..))))})})))).}.,||{||{||}..||||}},.....|||||,,,}},,....|||,,....,,||,||,|}}}}}}),,)})))),..