Forensic RNA Knowledge Base

Sequence Details

Symbol

HSALNT0371039

Sequence Length

242 nt

GC Content

0.5455

GGCAAGGGGAGCAGAUAGAUGCUCAGGAGCGAAAGACGCAGAGAAUUGGAUCUGGCGCCUCCUAACGCAGCCCGCACAGGAGCGAAGGAGAGUGUGACGAUCCCCCUGAUGCGGCUGAGAUGUUCUGAAAUGAAGACGUUGGCUCUCAUCCCCAGCCUGAAGAGAGAAAAUUCUGAGAUGGCUCCCUUACAGAUUGAGAGCAGAUACGGGGUUUCACCGUGCUAGCCAGGAUGAUCUCGAUC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-78.60 kcal/mol

Ensemble Metrics

Free Energy: -82.03

Frequency: 0.0038

Diversity: 74.91

Structure Visualization

Structure Prediction

MFE Structure Prediction

....((((((((........(((((((.(((.....)))........((((((.(((((((((..(((...((.....)).))).))))).)))).).))))).))))).))(((((.((((......((((....))))......))))..))))).....(((......)))......))))))))...((((((((((((.(((((.......))))))).))........))))))))

Thermodynamic Ensemble Prediction

,,,.{((((((({......,||||(((.(((.....}))........((((((.(((((((((..(((...((.....)).))).))))).)))).).))))).)))}}}))|((((,,,(,{{{......|}}.},,))}}}||||,}},,},}}}....,|{{|...,||}}|.....})))})}}...{{((((({{(((.(((((.......))))))).}),,...,..))))))))