Sequence Details

BLAST PRIMER
Symbol
HSALNT0374203
Sequence Length
460 nt
GC Content
0.3957
AGCCUCUUGCAAAUUCAUGUGGGACAUGGAAACGUGAAAGAAGAAAAGCUUUGUUGUGAUUUACUCUGUGGCCCUCCGAGACUUCGUGUAACAGCAACUGCAUUUUAAUGCAAUGGCAGCUAUGGAAAACACAAAACUAUCAGUCAUUGUCAAAUACUCCAUAAAUGGAGACAGAGAAGGGGUUCAGUUCUCUGUGUAACAAGGACAGAGGAGAAAGGCAUCUGCAGUGUCAAAUCUACAGAGACAAGUGCACCUGGAGACAAAUGACCAGACUACCAUAAAACAGAAGCUUAAUUAUGUUCACUUACAUUUUCAAAUUAUUCCCAACAAAUUACCCUGCUGAUCCUGCAUUGAGUGCAAGCAAAAAACUGUCAAGUUUUCCCUGGAUCUUUGGGCUUUCAUUUCUGAAGUCUCCUGUGUCACGUAAAACUUUGUUAAAUAAAUUUGUUAUGCUUUUCUC

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-101.90 kcal/mol
Ensemble Metrics
Free Energy: -111.44
Frequency: 0.0000
Diversity: 139.02
Structure Visualization
Structure Prediction
MFE Structure Prediction
.(((((((.....(((((((...........)))))))....((((.((.(((((((....((((((.(((....))))))....)))..)))))))..)).))))...((((((((....((((...........))))..))))))))......(((((....)))))......)))))))......((((((.(.....).))))))(((((((((((..((((..........((((((....((((((..((((((((((((..................(((........((((......))))..........)))...........(((....((((((((((...))))).....((((((....))))))....)))))...)))...)))))).....)))))).))).)))......)))))).........)))).)))))))))))
Thermodynamic Ensemble Prediction
.,,{((((,(,..(((((((...}}}}}}}..,})),,,},{({{{,((.{{(((((..,,{{{(((,(((,...}|||}}...,},}..}}}))}}.{((({....})))}.{{{{,|||||{|......,....}}}}.,)),.}))}},....(((((....))))){{{{{{{|,,,,,....}}||||||,{,{{,,|{|||}||(((({(((({(,,((({,,,,......{{{{{{,...(({{{{,,(({(((..,{{.,,,|.............,||,|,,,.,..{(((......)))}........................(((....((((((((((...))))),,...((((((....))))))....)))))...)))..{{{|.,,.})}})))))).})),)))......)))))).........)))),)))))))))),
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