Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_001009181.2

Sequence Length

649 nt

GC Content

0.3529

AUCAUCUCUUGAAGCUUCACUUCAACUUCACUACUUCUGUAGUCUCAUCUUGAGUAAAAGAGAACCCAGCCAACUAUGAAGUUCCUUGUCUUUGCCUUCAUCUUGGCUCUCAUGGUUUCCAUGAUUGGAGCUGAUUCAUCUGAAGAGUAUGGGUAUGGCCCUUAUCAGCCAGUUCCAGAACAACCACUAUACCCACAACCAUACCAACCACAAUACCAACAAUAUACCUUUUAAUAUCAUCAGUAACUGCAGGACAUGAUUAUUGAGGCUUGAUUGGCAAAUACGACUUCUACAUCCAUAUUCUCAUCUUUCAUACCAUAUCACACUACUACCACUUUUUGAAGAAUCAUCAAAGAGCAAUGCAAAUGAAAAACACUAUAAUUUACUGUAUACUCUUUGUUUCAGGAUACUUGCCUUUUCAAUUGUCACUUGAUGAUAUAAUUGCAAUUUAAACUGUUAAGCUGUGUUCAGUACUGUUUCUGAAUAAUAGAAAUCACUUCUCUAAAAGCAAUAAAUUUCAAGCACAUUUUUACAUGUAUGCUCCUUAUUUUUCUCUUUUCUAUUUAUAGGAAUAAUGAUUUCUUUCAUCAUCUUCUUUCCCAGUUUGACUAGCACAGAUUGAAGCCCAUAAUGUCAGAGGUCCUUAUUU

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-115.00 kcal/mol

Ensemble Metrics

Free Energy: -127.84

Frequency: 0.0000

Diversity: 200.95

Structure Visualization

Structure Prediction

MFE Structure Prediction

((((.(((((((((.....))))).....(((((....))))).((.((((......))))))....((((((..((((((...(........).)))))).)))))).((((((...))))))..)))).))))...(((((....(((((((.((((........))))(((....)))....................................................(((((((((((.((.(((((..((((....(((((..((..((................))..))...)))))....))))......................((((((((......(((((((..(((((......................))))).)))))))))))))))..)))))..........)).)).))))))))).....((((((...((((((((((((((((((........)))))))..((((((((.(((.(((((((....((((....((((.((........)).))))....))))....))))........))))))...)))))))).................))))))))).))...))))))..)))))))...)))))...........

Thermodynamic Ensemble Prediction

...,,{{{((((((.....))))},....(((((....))))).,,,,{{{|||.,{{{{{{{,...((((((..((((((...,........}.)))))).)))))).((((((...))))))..(({{{{{{{{{.,,{({{({((((((((.((({.....,..}|}}{{{....................................................,,,....{{({{((({({..,,,..,|,.||||,,,,|||||,,|||}||},..,,..,....,...},}))}}})))}}....|||.....................,,{{{|||,},,,,..(((((((..(((((..{{{,...........,},,.))))).))))))).,,}|||||,.{{{,.....}}|,|}||.|||}}}}}},,.|,{|(|,{{,...,{(({{{{((((((((((........))))))}.,||{{,,,|.,,,.,|||{{|,,},{{{{..,.||{({((......}))).,))),,..,,,,,},,))))}.,......})|||,,{}|||||||..,||.,,...,.....}}|||}}},.}}...}))}))}}),.,},.,}},,))))))}.,,,,..