Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_001271830.2

Sequence Length

474 nt

GC Content

0.6287

AUUCAGAACAGCUCUGCAGAGAGGAUCGGCGGGGACCAUGGCGGGCUCCCCAGACCAGGAGGGCUUCUUCAAUCUGCUGAGCCACGUGCAGGGCGACCGGAUGGAGGGACAGCGCUGUUCACUGCAAGCCGGGCCGGGCCAGACCACCAAGAGCCAGAGCGACCCCACCCCCGAGAUGGACAGCCUCAUGGACAUGCUGGCCAGUACCCAGGGCCGCCGCAUGGAUGACCAACGUGUGACAGUCAGCAGCCUGCCCGGCUUCCAGCCCGUGGGGUCCAAGGACGGAGCACAGAAACGAGCUGGGACCCUCAGUCCCCAACCCCUGCUCACCCCUCAGGACCCGACCGCUCUCGGCUUCCGUCGGAACAGCAGCCCCCAGCCCCCGACACAAGCCCCCUGAGGGCCUGAGGCAUCCUGGGUCUCACUCGGCCCCCAAAAACUGAUAAAAGAAUAAAACACUUAAAUGAAUAACAA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-167.20 kcal/mol

Ensemble Metrics

Free Energy: -174.10

Frequency: 0.0000

Diversity: 172.53

Structure Visualization

Structure Prediction

MFE Structure Prediction

..((((....((((((((....((.((((((((......((.((((((.((......)).))))))))....)))))))).))...))))))))....(((.(..(((.(((.((((((.((((...((((((...((((((....(((.((((((...((..........))...))).....))).))).....))))))....)))..)))...((((((.........)))))).)))).))))))))))))..).)))(((..((.((((((.(((...(((((.........((((((...))))))..........)))))...)))..)))))).)).)))...(((((..(((((....((........))..)))))..)))))...((.(((((((((((.......))))))...))))).))....))))...............................

Thermodynamic Ensemble Prediction

,,((({....(((({(({{{{{({,,{(((((({{({..,,.,||,||}}|...,{.||.|||||}}}}}..})))},))})}..,|||||||,....(({{{{,(((.{,{.(((((({.(((.{{((((((,,{((({,(,,..{{{.{{{(((,,((,...{{{.....,.}.)))...}}))).))).,.,{||||||....,,,..)))}|,({{{{|.........}))))).,,))}}}},))))))))}})}},}||{..((.((((((.{((...(((({..,....|.|||(((,|.}}}.)))),....,,,)))))...))}..)))))).}).},,,.{((({{..|||||,,,,||.,,.,,,.})..)))})..}))))...||.(((((((((((.......))))))...))))).},....}}},.....................,},,,.....