Sequence Details

BLAST PRIMER
Symbol
NM_001414367.1
Sequence Length
579 nt
GC Content
0.3713
AGUCCCUGCAUUGCGCGCGACCCGGCGGCGGGACAGGCUUGCUGCUUCCUCCUCCUCGGCCUCACCAUUCCAGACCAAAAUUGAAAAAAUGGUUGACCUCACCCAGGUAAUGGAUGAUGAAGUAUUCAUGGCUUUUGCAUCCUAUGCAACAAUUAUUCUUUCAAAAAUGAUGCUUAUGAGUACUGCAACUGCAUUCUAUAGAUUGACAAGAAAGGUUUUUGCCAAUCCAGAAGACUGUGUAGCAUUUGGCAAAGGAGAAAAUGCCAAGAAGUAUCUUCGAACAGAUGACAGAGUAGAACGUGUACGCAGAGGAAUUAUGAACUGGGGUAAACCCAUUUUGAAUAUUAGCAUUGCCAAUAUCCUGUAUUCUUGUUUUACAUUUGGAUUAGAAAUUUAACAUAGUAAUUCUUAAGUCUUUUGUCUGAUUUUUAAAGUACUUUCUUAUAAAUUUGGAUCAUGUUAUGAUUUGUAACAUUCACACAACACCUCACUUUUGAAUCUAUAAAAGAAUUGCACGUAUGAGAAACCUAUAUUUCAAUACUGCUGAAACAGACAUGAAAUAAAGAAUUUAAAGAAUGA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-122.30 kcal/mol
Ensemble Metrics
Free Energy: -135.54
Frequency: 0.0000
Diversity: 219.39
Structure Visualization
Structure Prediction
MFE Structure Prediction
..(((((((..((((((......(((((((((.....)))))))))((.((.(((...((((..........(((((............)))))..........))))...))).)).))((((((((((((..((((((...))))))..((((((........)))))))).))))))))))((....)).((((...(((((.((((((...)))))).))))).)))).(((.(((..((((((.....(((((...(((......))))))))...))))))))).)))....)))))).)))).))).....(((.((((.....)))).)))..(((((.((...)).))))).((..((((((((((((..((((((((..(((((((....((((......(((((........)))))......))))......))))))).))))(((((((.....)))))))...............((((((......))))))....(((.((((((((........)))).))))))).....))))..)))))).))))))....)).....
Thermodynamic Ensemble Prediction
.(((((.((...{({({{.....,)))))))))),((({{{,{({{((.((,(((,..((((,,.,,,,...(((((...,,.....,.)))))..........))))..,))),)).))||||,{||,|||},((((((...))))))..,((((({{,,....,,}}}|}||,}}}}}}}}|{{,,{{{{((((({{{((((,,,(((,.{{{|}||||,|||}},||.,,,,|}}}},}...|||}}|.}||||....|||,,,,,,||||||}}...{{||||{{{({(((.{.,{|{|..{{{|.|,,,.,,,(((.((((.....)))).})}..|||,|.{|.,,))..)))).,},)}}}},}))|,||),}}}}{{({,,{{{{{{,....{{|{,{||,.{{{((,.,,|,,,|}}}|...,||}}}}..,},.,}}},}|{||},(((((((.....))))))).........,}}}..}}}.},)}}}}})}.,))},,}))|.|||||||,...{{.{{||||{.,,|||,.,...))),..))))))).)).,},,,})))))},
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