Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_003357.5

Sequence Length

443 nt

GC Content

0.5440

AUACUAGCCCACCAGACUCAGAGACGGAACCAGAGACGGGCCAGAGCAUCCCCCUCCUCCACCAUGAAACUCGCUGUCACCCUCACCCUGGUCACACUGGCUCUCUGCUGCAGCUCCGCUUCUGCAGAGAUCUGCCCGAGCUUUCAGCGUGUCAUCGAAACCCUCCUCAUGGACACACCCUCCAGUUAUGAGGCUGCCAUGGAACUUUUCAGCCCUGAUCAAGACAUGAGGGAGGCAGGGGCUCAGCUGAAGAAGCUGGUGGACACCCUCCCCCAAAAGCCCAGAGAAAGCAUCAUUAAGCUCAUGGAAAAAAUAGCCCAAAGCUCACUGUGUAAUUAGCAUUUAGAAGCUGAAGAUCCCCAACUGCUCCAGCCUCUGCCGCUGCCAUGCUUUGAGUCCACGCCCACCAGCCUUGCUCUCUUCAAUAAACCACAAGCAUCUCA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-115.50 kcal/mol

Ensemble Metrics

Free Energy: -123.07

Frequency: 0.0000

Diversity: 128.19

Structure Visualization

Structure Prediction

MFE Structure Prediction

..............(((((((((..(..(((((.((.(((..(.(((.........................))).)..)))))...)))))..)...((((((((((.(.(((...))).).)))))))...)))...(((...)))(((((...((........))...))))).(((((..(((.((((((((.............)))))....))).)))..))))).(((((.(((...((((.((.((.(((.(((....(((.............)))...(((.((...((((..(((..........))).))))...)))))..(((((........)))))...)))))).)).)).))))....))).)))))...)))))))))...((......))..((((.................)))).....

Thermodynamic Ensemble Prediction

..............(((((((((.,(,.,,(((.(,.((({.,{(((,..,{{{{{{{{,..,,{{..,,,{|||{|.,|||,,...,}))).,),..((((((((((.(.(((...))).).)))))))...))).},|,|..}))}(((((...((........}},|,}}}}}.{((((..{{{.{||||{||.,|.,,....,.,))))}....}}).)}),,)}})),||{||,||{.,{((({.,{.|(|(((.(((.....,,..{{,..,{,..,|,|,..,,.,|..,.,|||..|||........,,,,,.|})}....||||..{{{||.,......))))}.,.,,,,,,.,),)),}}))}}..)}).)))}).,})))))))))...{,......|}..{({{.................})),.....