Sequence Details

BLAST PRIMER
Symbol
NM_003545.4
Sequence Length
412 nt
GC Content
0.5534
AGAUUUUUGCGGCUAUUUUCGUUGGUGUGUUGGUCAUGUCUGGUCGCGGCAAAGGCGGAAAGGGACUGGGUAAAGGAGGCGCUAAGCGUCACCGUAAGGUCCUGCGAGAUAACAUCCAGGGCAUUACCAAGCCUGCCAUCCGGCGCCUUGCUCGUCGCGGGGGUGUCAAGCGCAUUUCUGGUCUCAUCUACGAGGAGACUCGCGGGGUUCUGAAGGUGUUUCUGGAAAACGUGAUUCGUGAUGCUGUGACUUACACGGAGCACGCCAAACGCAAGACAGUGACAGCGAUGGAUGUGGUCUACGCGCUGAAGAGACAGGGACGCACUCUUUACGGCUUCGGCGGCUAAUGCUACCGCUUAAACGACUCAGCAUCUCGACUUCCCAAAUCAAAGGCCCUUUUCAGGGCCGCCCA

Secondary Structure

Generated by RNAfold
Predictions for this specific transcript isoform.
Minimum Free Energy
-138.40 kcal/mol
Ensemble Metrics
Free Energy: -145.13
Frequency: 0.0000
Diversity: 159.37
Structure Visualization
Structure Prediction
MFE Structure Prediction
.......((.(((........((((...(((((..(((.(((((((......((((((...((((((.......((.(((((...))))).))....))))))(((((((.(((((((((((........))))(((....)))(((((((......(((((((((.....)))))))))(((((.((...)).)))))..)))))))......(.((((.(((.....(((....((((.(.(((((.....))))).)))))....))).....))).)))).)..))))))).)))).)))(((((((....(((((.....)))))....)))))))(((....))).))))))...)))).)))))).)))))...))))......((((((....)))))))))))
Thermodynamic Ensemble Prediction
.......,(.(((.......{{((({((((({(.{{({{(((({(({{{{{.{(((({...{(({((,{{{...((.(((((...))))).)),{{,,|||||(,((,,..,,,||||}|||.,}}}...})))||{.,,,}})}||||||,}},|,||||||||{,..}})))}},},|(((((.((...)}.)))))|((({,..{{(,{{{{.,,{|}}{|}}...|||},.{(({(,{{{{{||.,,,,}}|||||||}|||..}|||....,}),},,,|||.|||||}}.)))),)))(((((((.,..{(((,....,)))}}....)))))))|||...,))).)))},}...,)}).)))))),})))}...,,,,......((((((....)))))))))},
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