Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_006551.4

Sequence Length

455 nt

GC Content

0.4703

AGGCUCCUGGGGUGGAGUCCAAAUCACUCAUUGUUUGUGAAAGCUGAGCUCACAGCAAAACAAGCCACCAUGAAGCUGUCGGUGUGUCUCCUGCUGGUCACGCUGGCCCUCUGCUGCUACCAGGCCAAUGCCGAGUUCUGCCCAGCUCUUGUUUCUGAGCUGUUAGACUUCUUCUUCAUUAGUGAACCUCUGUUCAAGUUAAGUCUUGCCAAAUUUGAUGCCCCUCCGGAAGCUGUUGCAGCCAAGUUAGGAGUGAAGAGAUGCACGGAUCAGAUGUCCCUUCAGAAACGAAGCCUCAUUGCGGAAGUCCUGGUGAAAAUAUUGAAGAAAUGUAGUGUGUGACAUGUAAAAACUUUCAUCCUGGUUUCCACUGUCUUUCAAUGACACCCUGAUCUUCACUGCAGAAUGUAAAGGUUUCAACGUCUUGCUUUAAUAAAUCACUUGCUCUCCACGUC

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-112.60 kcal/mol

Ensemble Metrics

Free Energy: -122.11

Frequency: 0.0000

Diversity: 162.67

Structure Visualization

Structure Prediction

MFE Structure Prediction

........((.((((((..(((.((((.........))))..((.((((((.(((((.....(((.........)))(((((((((...((....)).)))))))))....)))))......(((....))))))))).)).((((((........))))))..((((((...((.......(((((....)))))))..)))))).........((((........(.(((.(((((.((((..(((.(.(((((((((((......))).((((...((((......))))...))))(.(((((.((.(((((((...((......((((........)))).....)).)))))))..))))))).)((((.......))))......)))))))).)..))).....)))).))))).))).)........)))).)))..)))))).))

Thermodynamic Ensemble Prediction

...,..,.((.((((((..(({.,,{{,,...{{{{||,,..((((......))))...}}}|||.....{{{{{{,(((((((((.{,{,....)).)))))))))..,,,||||,.,,..(((....))){{||{(({,.((((((........)))))).}}}}|}||.,{{{{{,,..{((((....))))},{,,,,{{,,..,,.,|||||}|,|,,{..,}}..||{|..}))})},,},,.})})}}}}||||,|||.{{|{,,{,,|},,,,||,,,...||||{{{{{{{({((((({(,.((((....{(((((((,....{{{{{.{.((({,(,..,,,,|..,,....})))}}))))))),}}}}}}),)))}..)},)))).},))),,}}}...}))))))..,}}}}.}},,,..........}))..)))))).}}