Forensic RNA Knowledge Base

Sequence Details

Symbol

NM_012390.4

Sequence Length

666 nt

GC Content

0.4835

CACCUUUAUUUUCUGUCUUUCAACUGGCAAGAGUCAUUUUGACCAGCAGGUUAAUCAACUCUAAGACAGAUCCUCACGCAAAGAGGCAACUGAAAGGAUGAAAUCACUGACUUGGAUCUUGGGCCUUUGGGCUCUUGCAGCGUGUUUCACACCUGGUGAGAGUCAAAGAGGCCCCAGGGGACCAUAUCCACCUGGACCACUGGCUCCUCCUCCUCCACCAUGUUUUCCUUUUGGAACAGGAUUUGUUCCACCACCCCAUCCUCCACCCUAUGGUCCAGGGAGAUUUCCACCACCCCUUUCUCCACCCUAUGGUCCAGGGAGAAUCCCACCAUCCCCUCCUCCACCCUAUGGUCCAGGGAGAAUUCAAUCACACUCUCUUCCUCCUCCUUAUGGCCCAGGUUAUCCACAGCCACCUUCCCAACCAAGACCCUAUCCACCUGGACCUCCAUUUUUCCCUGUAAAUUCUCCAACUGAUCCUGCCCUCCCUACUCCUGCACCCUAAAUACAGACAACUGCAACAGGUGCCACCACCCACAAAAGACAACACUACCCUCGUAACUACUGCUUCUACUACCCAAAAAUAAGAAUUUCAACACUACUUCCAAGAGACUUUUAGAUAAAAUCACUUCCAUUUUUGGAUGAGAAUAAAGAUUUCCAAAGCACUGA

Secondary Structure

Generated by RNAfold

Predictions for this specific transcript isoform.

Minimum Free Energy

-154.30 kcal/mol

Ensemble Metrics

Free Energy: -166.92

Frequency: 0.0000

Diversity: 139.85

Structure Visualization

Structure Prediction

MFE Structure Prediction

...(((((((((((((((((....((((((((....))))).)))(((((...((((..((((((.((((((((((.((......))...)))..)))).......))).))))))....((((((((.(((((((((((.((((...)))))).)))))))))..))))))))((((((((((((.....((((((((..((.....................((((....))))..(((.....))).................))..))))))))(((((...............)))))....)))))))).(((((..............))))).........((((((((((((............)))).............((((...((....))...))))........................))))))))..........)))).............))))))))).............(((((.......(((....))).....)))))...........)))))))...........(((.....)))................(((((.((((..............)))).)))))............((((....)))).))))))))))................

Thermodynamic Ensemble Prediction

...(((((((((((((((({....{(({{((({{..,,|||{||,,,,||}}}|...}}}||,,,.(((,{((((.......))))...}))..{||||,....,.,,|.,|||||,((,((((((((.(((((((((((.((((...))))))},))))))))..))))))))|}||((((((((....,((((((((..((..................|...,{,...,||||,{({{..,||}}}.........,.......))..))))))))|((((...............))))}....)))))))),(((({..........,,,,,,............((((((((((((............}}}}.............((((...((....))...))))...........,,}..........)))))))).........,,,}}.....,,,.....,})}}})}}.............(((((.......(((....))).....)))))...........})))))}.....,.....|||.....,,,.,.,............,.|||,,,,,.........,,,,,|||,.,,,,,{,,...,}}...{{{{,,,,)))).))))))))))................