Basic Information
Symbol
circPVT1
RNA Class
circRNA
Alias
Pvt1 oncogene
NCRNA00079
LINC00079
onco-lncRNA-100
MIR1204HG
TP53LC09
non-protein coding RNA 79
long intergenic non-protein coding RNA 79
MIR1204, MIR1205, MIR1206 and MIR1207 host gene
plasmacytoma variant translocation 1
pvt-1 (murine) oncogene homolog, MYC activator
Pvt1 oncogene homolog (mouse)
Pvt1 oncogene (non-protein coding)
CXCR4/PVT1 fusion
HIST1H2BD/PVT1 fusion
MIR1204, MIR1205, MIR1206 and MIR1207 host
Oncogene PVT-1 (MYC activator)
PVT1/CASC8 fusion
PVT1/CCDC26 fusion
PVT1/IFRD1 fusion
PVT1/IRF2BP2 fusion
PVT1/LINC00824 fusion
PVT1/MYC fusion
PVT1/NFIL3 fusion
PVT1/NSMCE2 fusion
PVT1/SPRY2 fusion
PVT1/UBB fusion
RP11-89K10/PVT1 fusion
PVT1
HSALNG0068477
NONHSAG051258.2
Location (GRCh37)
1:226107580-226109071
UCSC (hg19)
Location (GRCh38)
1:225919880-225921371
UCSC (hg38)
Host Gene
PVT1
Host Category
lncRNA
External Database
Transcripts
| ID | Type | Location (GRCh37) | Location (GRCh38) | Length | GC |
|---|---|---|---|---|---|
| hsa_PVT1_0003700 | Intron-Exon-Intron | chr8:128981662-129022690 | chr8:127969416-128010444 | 508 nt | 0.4488 |
| hsa_PVT1_0003800 | Intron-Exon-Intron | chr8:128988469-129021964 | chr8:127976223-128009718 | 250 nt | 0.3880 |
| hsa_PVT1_0003900 | Intron-Exon-Intron | chr8:128994606-129001537 | chr8:127982360-127989291 | 120 nt | 0.5000 |
| hsa_PVT1_0004000 | Intron-Exon-Intron | chr8:128994606-129022690 | chr8:127982360-128010444 | 133 nt | 0.4135 |
| hsa_PVT1_0004100 | Intron-Intron | chr8:128995540-128995716 | chr8:127983294-127983470 | 177 nt | 0.3955 |
| hsa_PVT1_0004500 | Intron-Exon-Intron | chr8:128996150-129005185 | chr8:127983904-127992939 | 301 nt | 0.5382 |
| hsa_PVT1_0004600 | Intron-Exon-Intron | chr8:128996150-129005297 | chr8:127983904-127993051 | 71 nt | 0.4366 |
| hsa_PVT1_0004700 | Intron-Exon-Intron | chr8:128996150-129022690 | chr8:127983904-128010444 | 127 nt | 0.4173 |
| hsa_PVT1_0005000 | Intron-Exon-Intron | chr8:129001408-129032965 | chr8:127989162-128020719 | 250 nt | 0.3800 |
| hsa_PVT1_0005100 | Intron-Exon-Intron | chr8:129001408-129060855 | chr8:127989162-128048609 | 250 nt | 0.3640 |
Showing 31 to 40 of 66 entries
Forensic Context
No forensic context available.